Homer Known Motif Enrichment Results

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 4016, Total Background Sequences = 44987
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-452-1.042e+030.00001104.027.49%2388.85.31%motif file (matrix) pdf
2Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer1e-436-1.006e+030.0000659.016.41%701.91.56%motif file (matrix) pdf
3FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq/Homer1e-224-5.159e+020.0000951.023.68%3334.27.42%motif file (matrix) pdf
4Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq/Homer1e-217-5.013e+020.0000794.019.77%2436.65.42%motif file (matrix) pdf
5FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-216-4.982e+020.00001047.026.07%4059.59.03%motif file (matrix) pdf
6Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-195-4.512e+020.0000383.09.54%583.21.30%motif file (matrix) pdf
7Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-192-4.425e+020.0000832.020.72%2925.96.51%motif file (matrix) pdf
8NFY(CCAAT)/Promoter/Homer1e-116-2.678e+020.0000690.017.18%2942.56.55%motif file (matrix) pdf
9FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-104-2.412e+020.0000404.010.06%1253.12.79%motif file (matrix) pdf
10Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-72-1.679e+020.0000111.02.76%115.40.26%motif file (matrix) pdf
11Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq/Homer1e-54-1.266e+020.0000999.024.88%6885.715.32%motif file (matrix) pdf
12NF-E2(bZIP)/K562-NFE2-ChIP-Seq/Homer1e-52-1.207e+020.0000102.02.54%153.80.34%motif file (matrix) pdf
13Sp1(Zf)/Promoter/Homer1e-50-1.164e+020.0000557.013.87%3173.97.06%motif file (matrix) pdf
14CTCF(Zf)/CD4+-CTCF-ChIP-Seq/Homer1e-45-1.058e+020.0000165.04.11%478.81.07%motif file (matrix) pdf
15Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-43-1.000e+020.000083.02.07%122.10.27%motif file (matrix) pdf
16MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-38-8.761e+010.0000203.05.05%789.31.76%motif file (matrix) pdf
17MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-27-6.430e+010.0000439.010.93%2824.46.28%motif file (matrix) pdf
18GFY-Staf/Promoters/Homer1e-25-5.867e+010.000096.02.39%292.70.65%motif file (matrix) pdf
19Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-22-5.254e+010.0000146.03.64%636.21.42%motif file (matrix) pdf
20BORIS(Zf)/K562-CTCFL-ChIP-Seq/Homer1e-21-4.906e+010.0000227.05.65%1264.12.81%motif file (matrix) pdf
21Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-21-4.888e+010.0000425.010.58%2939.06.54%motif file (matrix) pdf
22Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer1e-20-4.707e+010.0000349.08.69%2300.35.12%motif file (matrix) pdf
23GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-20-4.633e+010.000066.01.64%180.80.40%motif file (matrix) pdf
24NF1(CTF)/LNCAP-NF1-ChIP-Seq/Homer1e-19-4.604e+010.0000266.06.62%1613.53.59%motif file (matrix) pdf
25Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-19-4.468e+010.00001285.032.00%11489.925.56%motif file (matrix) pdf
26GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-19-4.451e+010.0000122.03.04%529.41.18%motif file (matrix) pdf
27GFY(?)/Promoter/Homer1e-18-4.264e+010.000091.02.27%339.00.75%motif file (matrix) pdf
28CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-18-4.228e+010.0000349.08.69%2375.45.28%motif file (matrix) pdf
29Nanog(Homeobox)/mES-Nanog-ChIP-Seq/Homer1e-18-4.189e+010.00001641.040.86%15360.734.17%motif file (matrix) pdf
30Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-18-4.165e+010.0000145.03.61%713.91.59%motif file (matrix) pdf
31Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-16-3.693e+010.0000411.010.23%3029.96.74%motif file (matrix) pdf
32Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-15-3.558e+010.0000636.015.84%5196.011.56%motif file (matrix) pdf
33Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq/Homer1e-15-3.538e+010.0000406.010.11%3014.36.71%motif file (matrix) pdf
34Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-15-3.474e+010.0000104.02.59%477.01.06%motif file (matrix) pdf
35EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-14-3.405e+010.0000156.03.88%869.01.93%motif file (matrix) pdf
36GABPA(ETS)/Jurkat-GABPa-ChIP-Seq/Homer1e-14-3.316e+010.0000509.012.67%4031.98.97%motif file (matrix) pdf
37NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq/Homer1e-14-3.245e+010.0000839.020.89%7307.616.26%motif file (matrix) pdf
38GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-13-3.210e+010.000053.01.32%166.20.37%motif file (matrix) pdf
39ETV1(ETS)/GIST48-ETV1-ChIP-Seq/Homer1e-13-3.190e+010.0000715.017.80%6079.813.52%motif file (matrix) pdf
40JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-13-3.175e+010.000082.02.04%347.80.77%motif file (matrix) pdf
41Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-13-3.073e+010.00001028.025.60%9303.720.70%motif file (matrix) pdf
42CRE(bZIP)/Promoter/Homer1e-13-3.072e+010.0000174.04.33%1052.62.34%motif file (matrix) pdf
43TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-13-3.009e+010.0000385.09.59%2931.76.52%motif file (matrix) pdf
44TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer1e-13-3.000e+010.0000296.07.37%2117.34.71%motif file (matrix) pdf
45AP2gamma(AP2)/MCF7-TFAP2c-ChIP-Seq/Homer1e-12-2.851e+010.0000604.015.04%5079.411.30%motif file (matrix) pdf
46GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-12-2.808e+010.0000595.014.82%5003.411.13%motif file (matrix) pdf
47Tlx?/NPC-H3K4me1-ChIP-Seq/Homer1e-11-2.747e+010.0000227.05.65%1549.33.45%motif file (matrix) pdf
48E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-11-2.686e+010.0000415.010.33%3289.17.32%motif file (matrix) pdf
49Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-11-2.667e+010.0000400.09.96%3151.57.01%motif file (matrix) pdf
50Gata1(Zf)/K562-GATA1-ChIP-Seq/Homer1e-11-2.636e+010.0000245.06.10%1727.13.84%motif file (matrix) pdf
51AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq/Homer1e-11-2.623e+010.0000624.015.54%5347.311.89%motif file (matrix) pdf
52ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer1e-11-2.619e+010.0000368.09.16%2860.16.36%motif file (matrix) pdf
53Gata2(Zf)/K562-GATA2-ChIP-Seq/Homer1e-11-2.607e+010.0000272.06.77%1975.14.39%motif file (matrix) pdf
54c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq/Homer1e-10-2.527e+010.0000193.04.81%1289.22.87%motif file (matrix) pdf
55Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq/Homer1e-10-2.453e+010.0000146.03.64%902.92.01%motif file (matrix) pdf
56CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer1e-10-2.449e+010.0000346.08.62%2693.95.99%motif file (matrix) pdf
57Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq/Homer1e-10-2.434e+010.0000134.03.34%806.91.79%motif file (matrix) pdf
58ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer1e-10-2.432e+010.0000526.013.10%4435.99.87%motif file (matrix) pdf
59Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-10-2.308e+010.0000192.04.78%1316.12.93%motif file (matrix) pdf
60Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-9-2.145e+010.0000391.09.74%3200.87.12%motif file (matrix) pdf
61ETS(ETS)/Promoter/Homer1e-9-2.115e+010.0000237.05.90%1755.83.91%motif file (matrix) pdf
62Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer1e-7-1.842e+010.0000192.04.78%1401.93.12%motif file (matrix) pdf
63EGR(Zf)/K562-EGR1-ChIP-Seq/Homer1e-7-1.820e+010.0000200.04.98%1478.43.29%motif file (matrix) pdf
64EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer1e-7-1.797e+010.0000294.07.32%2362.05.25%motif file (matrix) pdf
65MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-7-1.680e+010.0000739.018.40%6873.315.29%motif file (matrix) pdf
66Hoxc9/Ainv15-Hoxc9-ChIP-Seq/Homer1e-6-1.587e+010.0000191.04.76%1445.73.22%motif file (matrix) pdf
67ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer1e-6-1.565e+010.0000708.017.63%6604.114.69%motif file (matrix) pdf
68GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-6-1.490e+010.000045.01.12%215.10.48%motif file (matrix) pdf
69NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-6-1.473e+010.000033.00.82%134.90.30%motif file (matrix) pdf
70Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-6-1.424e+010.0000157.03.91%1168.52.60%motif file (matrix) pdf
71Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer1e-6-1.414e+010.0000133.03.31%953.72.12%motif file (matrix) pdf
72Rfx1(HTH)/NPC-Rfx1-ChIP-Seq/Homer1e-5-1.368e+010.0000102.02.54%689.01.53%motif file (matrix) pdf
73ATF3(bZIP)/K562-ATF3-ChIP-Seq/Homer1e-5-1.365e+010.0000111.02.76%768.01.71%motif file (matrix) pdf
74RFX(HTH)/K562-RFX3-ChIP-Seq/Homer1e-5-1.343e+010.000062.01.54%358.50.80%motif file (matrix) pdf
75RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer1e-5-1.317e+010.0000272.06.77%2286.95.09%motif file (matrix) pdf
76Hoxb4/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-5-1.317e+010.000079.01.97%500.41.11%motif file (matrix) pdf
77E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-5-1.305e+010.0000432.010.76%3884.98.64%motif file (matrix) pdf
78RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer1e-5-1.298e+010.0000368.09.16%3242.37.21%motif file (matrix) pdf
79Lhx3-like?(Homeobox)/Forebrain-p300-ChIP-Seq/Homer1e-5-1.245e+010.0000371.09.24%3292.47.32%motif file (matrix) pdf
80E-box(HLH)/Promoter/Homer1e-5-1.243e+010.000064.01.59%386.40.86%motif file (matrix) pdf
81HOXA9/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer1e-5-1.220e+010.0000237.05.90%1975.94.40%motif file (matrix) pdf
82E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-4-1.096e+010.0000112.02.79%826.61.84%motif file (matrix) pdf
83SCL/HPC7-Scl-ChIP-Seq/Homer1e-4-1.082e+010.00011859.046.29%19357.443.06%motif file (matrix) pdf
84E2F1(E2F)/Hela-E2F1-ChIP-Seq/Hoemr1e-4-1.066e+010.0001232.05.78%1974.14.39%motif file (matrix) pdf
85BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer1e-4-1.063e+010.0001585.014.57%5572.112.40%motif file (matrix) pdf
86Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-4-1.059e+010.0001687.017.11%6644.314.78%motif file (matrix) pdf
87Sox2(HMG)/mES-Sox2-ChIP-Seq/Homer1e-4-1.021e+010.0001319.07.94%2856.66.35%motif file (matrix) pdf
88p53(p53)/p53-ChIP-Chip/Homer1e-4-1.010e+010.00017.00.17%10.60.02%motif file (matrix) pdf
89Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-4-1.003e+010.0001224.05.58%1916.34.26%motif file (matrix) pdf
90PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-4-9.701e+000.0002203.05.05%1721.73.83%motif file (matrix) pdf
91PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-4-9.672e+000.000245.01.12%266.50.59%motif file (matrix) pdf
92Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-4-9.642e+000.0002695.017.31%6785.715.09%motif file (matrix) pdf
93EBF1(EBF)/Near-E2A-ChIP-Seq/Homer1e-3-9.134e+000.0003542.013.50%5204.511.58%motif file (matrix) pdf
94Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer1e-3-9.072e+000.0003970.024.15%9763.021.72%motif file (matrix) pdf
95EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer1e-3-9.053e+000.0003275.06.85%2459.85.47%motif file (matrix) pdf
96Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-3-8.913e+000.0003620.015.44%6037.313.43%motif file (matrix) pdf
97PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq/Homer1e-3-8.741e+000.000477.01.92%554.51.23%motif file (matrix) pdf
98USF1(HLH)/GM12878-Usf1-ChIP-Seq/Homer1e-3-8.617e+000.0004212.05.28%1846.44.11%motif file (matrix) pdf
99Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer1e-3-8.577e+000.0004206.05.13%1788.63.98%motif file (matrix) pdf
100GATA:SCL/Ter119-SCL-ChIP-Seq/Homer1e-3-7.770e+000.001051.01.27%342.30.76%motif file (matrix) pdf
101RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer1e-3-7.661e+000.0011261.06.50%2375.95.29%motif file (matrix) pdf
102ETS:RUNX/Jurkat-RUNX1-ChIP-Seq/Homer1e-3-7.465e+000.001354.01.34%373.30.83%motif file (matrix) pdf
103ERE(NR/IR3)/MCF7-ERa-ChIP-Seq/Homer1e-3-7.452e+000.0013109.02.71%879.51.96%motif file (matrix) pdf
104NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer1e-3-7.326e+000.0014204.05.08%1814.14.04%motif file (matrix) pdf
105ZBTB33/GM12878-ZBTB33-ChIP-Seq/Homer1e-3-7.140e+000.001743.01.07%283.80.63%motif file (matrix) pdf
106STAT1(Stat)/HelaS3-STAT1-ChIP-Seq/Homer1e-3-7.033e+000.0019101.02.51%814.61.81%motif file (matrix) pdf
107NFAT:AP1/Jurkat-NFATC1-ChIP-Seq/Homer1e-3-6.986e+000.002066.01.64%489.31.09%motif file (matrix) pdf
108Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-3-6.968e+000.0020444.011.06%4303.49.57%motif file (matrix) pdf
109RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-2-6.789e+000.0024285.07.10%2660.75.92%motif file (matrix) pdf
110SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer1e-2-6.620e+000.0028405.010.08%3915.38.71%motif file (matrix) pdf
111X-box(HTH)/NPC-H3K4me1-ChIP-Seq/Homer1e-2-6.531e+000.003049.01.22%345.90.77%motif file (matrix) pdf
112STAT5(Stat)/mCD4+-Stat5a|b-ChIP-Seq/Homer1e-2-6.052e+000.0048112.02.79%948.32.11%motif file (matrix) pdf
113ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-2-6.025e+000.0049305.07.59%2906.36.47%motif file (matrix) pdf
114Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-2-5.889e+000.0056530.013.20%5284.411.76%motif file (matrix) pdf
115STAT4(Stat)/CD4-Stat4-ChIP-Seq/Homer1e-2-5.559e+000.0077314.07.82%3026.86.73%motif file (matrix) pdf
116Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-2-5.544e+000.0077529.013.17%5299.411.79%motif file (matrix) pdf
117IRF4(IRF)/GM12878-IRF4-ChIP-Seq/Homer1e-2-5.479e+000.0082157.03.91%1415.33.15%motif file (matrix) pdf
118ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer1e-2-5.434e+000.0085159.03.96%1437.63.20%motif file (matrix) pdf
119Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-2-5.280e+000.009877.01.92%633.01.41%motif file (matrix) pdf
120NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer1e-2-5.135e+000.011229.00.72%193.10.43%motif file (matrix) pdf
121GFX(?)/Promoter/Homer1e-2-5.101e+000.011515.00.37%79.20.18%motif file (matrix) pdf
122NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq/Homer1e-2-4.986e+000.0128281.07.00%2715.06.04%motif file (matrix) pdf
123Unknown/Homeobox/Limb-p300-ChIP-Seq/Homer1e-2-4.746e+000.0162215.05.35%2042.84.54%motif file (matrix) pdf
124NRF1/Promoter/Homer1e-2-4.681e+000.0171151.03.76%1388.73.09%motif file (matrix) pdf
125Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-2-4.673e+000.0171695.017.31%7158.815.92%motif file (matrix) pdf