Details for gene set BIOCARTA_TFF_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___PanKO_vs_Cyp2c44KO.RPKM_matrix___PanKO_vs_Cyp2c44KO.cls #PanKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___PanKO_vs_Cyp2c44KO.cls#PanKO_versus_Cyp2c44KO
Upregulated in class	PanKO
GeneSet	BIOCARTA_TFF_PATHWAY
Enrichment Score (ES)	0.72627884
Normalized Enrichment Score (NES)	1.3787254
Nominal p-value	0.013972056
FDR q-value	0.161236
FWER p-Value	0.338

Fig 1: Enrichment plot: BIOCARTA_TFF_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tff3	na	258	1.366	0.1033	Yes
2	Hras	na	1162	0.948	0.1621	Yes
3	Akt1	na	1523	0.861	0.2238	Yes
4	Itgb1	na	1945	0.777	0.2777	Yes
5	Tff2	na	1970	0.774	0.3384	Yes
6	Apaf1	na	2236	0.739	0.3921	Yes
7	Cycs	na	2764	0.664	0.4351	Yes
8	Pik3cg	na	2908	0.644	0.4835	Yes
9	Mapk3	na	3072	0.625	0.5300	Yes
10	Ctnnb1	na	3248	0.605	0.5747	Yes
11	Bad	na	3394	0.588	0.6185	Yes
12	Rhoa	na	3917	0.540	0.6519	Yes
13	Grb2	na	4256	0.508	0.6860	Yes
14	Erbb2	na	4695	0.475	0.7158	Yes
15	Egfr	na	6665	0.347	0.7083	Yes
16	Shc1	na	7089	0.323	0.7263	Yes
17	Pik3ca	na	11644	0.115	0.6546	No
18	Mapk1	na	12870	0.070	0.6384	No
19	Casp9	na	14202	0.028	0.6170	No
20	Gh	na	44618	-0.014	0.0784	No
21	Tff1	na	45298	-0.026	0.0684	No
22	Pik3r1	na	48173	-0.125	0.0273	No
23	Muc2	na	52474	-0.370	-0.0198	No
24	Sos1	na	53339	-0.445	0.0000	No
25	Ghr	na	55004	-0.682	0.0244	No

Fig 2: BIOCARTA_TFF_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_TFF_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_TFF_PATHWAY