Homer de novo Motif Results

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1474
Total background sequences = 48592
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-29-6.808e+010.88%0.00%85.4bp (1467.1bp)PB0056.1_Rfxdc2_1/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
2 1e-29-6.716e+0127.34%15.73%1697.8bp (1750.5bp)PB0137.1_Irf3_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
3 1e-25-5.963e+012.37%0.19%1294.4bp (1743.9bp)PB0119.1_Foxa2_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
4 1e-23-5.435e+0129.31%18.42%1785.4bp (1751.2bp)PH0115.1_Nkx2-6/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
5 1e-22-5.270e+0133.04%21.76%1741.6bp (1729.4bp)MA0027.1_En1/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
6 1e-22-5.199e+0130.12%19.33%1760.1bp (1752.3bp)ETS:E-box/HPC7-Scl-ChIP-Seq/Homer
More Information | Similar Motifs Found		motif file (matrix)
7 1e-21-4.928e+010.95%0.01%767.5bp (1240.5bp)Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer
More Information | Similar Motifs Found		motif file (matrix)
8 1e-21-4.852e+0129.24%18.93%1585.9bp (1754.1bp)Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq/Homer
More Information | Similar Motifs Found		motif file (matrix)
9 1e-20-4.810e+0135.48%24.40%1695.3bp (1757.2bp)PB0099.1_Zfp691_1/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
10 1e-19-4.516e+0127.48%17.77%1665.7bp (1720.3bp)PB0200.1_Zfp187_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
11 1e-18-4.239e+0127.54%18.11%1564.3bp (1633.1bp)PB0131.1_Gmeb1_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
12 1e-17-4.129e+0158.96%47.56%1671.7bp (1755.7bp)MA0164.1_Nr2e3/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
13 1e-17-4.073e+0143.76%32.87%1721.7bp (1750.1bp)CHR/Cell-Cycle-Exp/Homer
More Information | Similar Motifs Found		motif file (matrix)
14 1e-17-3.935e+0139.35%28.96%1652.3bp (1704.6bp)SD0001.1_at_AC_acceptor/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
15 1e-16-3.782e+012.85%0.56%1276.3bp (1459.8bp)SD0001.1_at_AC_acceptor/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
16 1e-16-3.711e+0113.57%7.33%1832.8bp (1752.5bp)PB0141.1_Isgf3g_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
17 1e-15-3.525e+0121.30%13.62%1735.1bp (1763.7bp)PB0203.1_Zfp691_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
18 1e-13-3.119e+0132.56%23.89%1700.9bp (1744.0bp)MA0442.1_SOX10/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
19 1e-13-3.070e+010.81%0.03%1872.9bp (1608.6bp)PB0034.1_Irf4_1/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
20 1e-12-2.768e+0122.25%15.27%1536.2bp (1698.5bp)MA0117.1_Mafb/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
21 *1e-11-2.719e+0146.81%37.86%1707.1bp (1751.9bp)PB0187.1_Tcf7_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
22 *1e-11-2.687e+0159.97%50.95%1681.0bp (1758.5bp)Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
More Information | Similar Motifs Found		motif file (matrix)
23 *1e-11-2.591e+0127.82%20.38%1695.0bp (1713.4bp)MA0035.1_Gata1/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
24 *1e-10-2.426e+011.22%0.15%1116.8bp (1801.7bp)PB0133.1_Hic1_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
25 *1e-10-2.405e+0134.60%26.85%1682.3bp (1702.6bp)PB0094.1_Zfp128_1/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
26 *1e-10-2.346e+010.41%0.01%1340.2bp (2578.2bp)STAT6/Macrophage-Stat6-ChIP-Seq/Homer
More Information | Similar Motifs Found		motif file (matrix)
27 *1e-7-1.732e+011.42%0.32%1454.4bp (1574.5bp)PH0037.1_Hdx/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
28 *1e-7-1.642e+012.04%0.65%929.4bp (1755.2bp)MA0104.2_Mycn/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
29 *1e-6-1.587e+0140.43%33.96%1682.7bp (1746.5bp)PB0171.1_Sox18_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
30 *1e-6-1.509e+012.58%1.00%1269.5bp (1649.3bp)PB0110.1_Bcl6b_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
31 *1e-5-1.349e+0128.09%22.81%1844.7bp (1749.9bp)MA0032.1_FOXC1/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
32 *1e-5-1.328e+0150.54%44.48%1719.6bp (1753.8bp)PB0154.1_Osr1_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
33 *1e-5-1.201e+0113.70%10.08%1683.6bp (1741.5bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer
More Information | Similar Motifs Found		motif file (matrix)
34 *1e-4-1.025e+010.20%0.00%110.6bp (918.2bp)Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer
More Information | Similar Motifs Found		motif file (matrix)
35 *1e-3-7.706e+000.14%0.00%274.3bp (537.2bp)PB0113.1_E2F3_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
36 *1e-2-5.194e+0011.33%9.33%1469.3bp (1729.4bp)PH0168.1_Hnf1b/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
37 *1e-2-5.092e+000.54%0.18%677.4bp (1579.4bp)POL008.1_DCE_S_I/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
38 *1e-2-4.886e+0038.06%34.99%1674.0bp (1743.0bp)PH0148.1_Pou3f3/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
39 *1e-1-3.471e+000.14%0.02%0.0bp (1854.2bp)PB0130.1_Gm397_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
40 *1e-1-2.954e+000.14%0.03%334.6bp (1681.1bp)PB0178.1_Sox8_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)
41 *1e0-2.009e+000.14%0.04%339.6bp (1832.4bp)PH0158.1_Rhox11_2/Jaspar
More Information | Similar Motifs Found		motif file (matrix)